About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46564
Paelopatides46565NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT
Paelopatides46566FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides46567
Paelopatides46568PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46569
Paelopatides46570MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Paelopatides46571
Paelopatides46572PROTEIN CBG26694
Paelopatides46574
Paelopatides46575C2H2 ZINC FINGER CGI-62-RELATED
Paelopatides46576SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides46577PRESENILIN
Paelopatides46578TYROSINE-PROTEIN KINASE
Paelopatides46579REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46580VESICULAR, OVEREXPRESSED IN CANCER, PROSURVIVAL PROTEIN 1
Paelopatides46581SI:CH73-250A16.5-RELATED
Paelopatides46582
Paelopatides46583
Paelopatides46584FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46585
Paelopatides46586ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46587CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46588ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1
Paelopatides46591ENDONUCLEASE V
Paelopatides46592ENDONUCLEASE V
Paelopatides46593DYNEIN LIGHT CHAIN
Paelopatides46594BONUS, ISOFORM C-RELATED
Paelopatides46595REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46596BONUS, ISOFORM C-RELATED
Paelopatides46597BONUS, ISOFORM C-RELATED
Paelopatides46598EPM2A-INTERACTING PROTEIN 1
Paelopatides46599TRANSPOSON
Paelopatides46600GAG-RELATED PROTEIN
Paelopatides46601
Paelopatides46602CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46603
Paelopatides46604
Paelopatides46605
Paelopatides46606GAG-RELATED PROTEIN
Paelopatides46607GAG-RELATED PROTEIN
Paelopatides46608
Paelopatides46609RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides46610PROTEIN, PUTATIVE-RELATED
Paelopatides46611ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46612FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46613
Paelopatides46614REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46615PROTEIN CBG26694
Paelopatides46616FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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