The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides46309 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides46310 | |
| Paelopatides46311 | |
| Paelopatides46312 | |
| Paelopatides46313 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides46314 | HYR DOMAIN-CONTAINING PROTEIN |
| Paelopatides46315 | |
| Paelopatides46316 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46317 | |
| Paelopatides46318 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides46319 | |
| Paelopatides46320 | |
| Paelopatides46321 | FI04035P |
| Paelopatides46322 | FI04035P |
| Paelopatides46323 | ZINC FINGER PROTEIN |
| Paelopatides46324 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| Paelopatides46325 | V-TYPE PROTON ATPASE SUBUNIT C |
| Paelopatides46326 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides46327 | POTASSIUM CHANNEL, SUBFAMILY K |
| Paelopatides46328 | |
| Paelopatides46329 | |
| Paelopatides46330 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46331 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides46332 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| Paelopatides46333 | TRANSKETOLASE |
| Paelopatides46334 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4 |
| Paelopatides46335 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
| Paelopatides46336 | |
| Paelopatides46337 | |
| Paelopatides46338 | SEMINAL PLASMA PROTEIN |
| Paelopatides46339 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides46340 | |
| Paelopatides46341 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides46342 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides46343 | COILED-COIL DOMAIN-CONTAINING PROTEIN 151 |
| Paelopatides46344 | |
| Paelopatides46345 | REVERSE TRANSCRIPTASE |
| Paelopatides46346 | |
| Paelopatides46347 | |
| Paelopatides46348 | |
| Paelopatides46349 | |
| Paelopatides46350 | |
| Paelopatides46351 | |
| Paelopatides46352 | |
| Paelopatides46356 | |
| Paelopatides46357 | |
| Paelopatides46358 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides46359 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46360 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides46362 | ZGC:195170 |
