The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides46048 | PROTEIN CBG26694 |
| Paelopatides46049 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
| Paelopatides46050 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides46051 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Paelopatides46052 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides46053 | GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 |
| Paelopatides46054 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| Paelopatides46055 | |
| Paelopatides46056 | |
| Paelopatides46057 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| Paelopatides46058 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| Paelopatides46059 | HYR DOMAIN-CONTAINING PROTEIN |
| Paelopatides46060 | |
| Paelopatides46061 | OXIDOREDUCTASE-RELATED |
| Paelopatides46062 | |
| Paelopatides46065 | |
| Paelopatides46066 | BEN DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides46067 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides46068 | SOLUTE CARRIER FAMILY 17 |
| Paelopatides46069 | SOLUTE CARRIER FAMILY 17 |
| Paelopatides46070 | |
| Paelopatides46071 | |
| Paelopatides46072 | REVERSE TRANSCRIPTASES |
| Paelopatides46073 | DED DOMAIN-CONTAINING PROTEIN |
| Paelopatides46074 | OS05G0310600 PROTEIN |
| Paelopatides46075 | |
| Paelopatides46076 | REVERSE TRANSCRIPTASES |
| Paelopatides46077 | |
| Paelopatides46078 | ZINC FINGER PROTEIN |
| Paelopatides46079 | |
| Paelopatides46080 | |
| Paelopatides46081 | |
| Paelopatides46082 | |
| Paelopatides46083 | AGAP008221-PA |
| Paelopatides46084 | |
| Paelopatides46085 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides46086 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46087 | FIBRINOGEN ALPHA CHAIN |
| Paelopatides46088 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides46089 | LEUCINE RICH REPEAT PROTEIN |
| Paelopatides46090 | DED DOMAIN-CONTAINING PROTEIN |
| Paelopatides46091 | |
| Paelopatides46092 | |
| Paelopatides46093 | |
| Paelopatides46094 | |
| Paelopatides46095 | |
| Paelopatides46096 | DED DOMAIN-CONTAINING PROTEIN |
| Paelopatides46097 | PROTEIN CBG26694 |
| Paelopatides46098 | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE |
| Paelopatides46099 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
