The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides46151 | COX ASSEMBLY MITOCHONDRIAL PROTEIN |
| Paelopatides46152 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46153 | |
| Paelopatides46157 | SNF2/RAD54 FAMILY MEMBER |
| Paelopatides46158 | WD REPEAT AND HMG-BOX DNA BINDING PROTEIN |
| Paelopatides46159 | |
| Paelopatides46160 | NG5 |
| Paelopatides46161 | |
| Paelopatides46162 | |
| Paelopatides46163 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| Paelopatides46164 | CADHERIN-23 |
| Paelopatides46165 | CADHERIN-23 |
| Paelopatides46166 | PROTEIN CBG26694 |
| Paelopatides46167 | |
| Paelopatides46168 | POL PROTEIN |
| Paelopatides46169 | |
| Paelopatides46170 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| Paelopatides46171 | |
| Paelopatides46172 | PROTEIN BARK BEETLE |
| Paelopatides46173 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides46175 | SI:CH211-262H13.3-RELATED-RELATED |
| Paelopatides46176 | BONUS, ISOFORM C-RELATED |
| Paelopatides46177 | BONUS, ISOFORM C-RELATED |
| Paelopatides46178 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| Paelopatides46179 | |
| Paelopatides46180 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides46181 | FI04643P-RELATED |
| Paelopatides46182 | |
| Paelopatides46183 | |
| Paelopatides46184 | |
| Paelopatides46185 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides46186 | POL PROTEIN |
| Paelopatides46187 | |
| Paelopatides46188 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides46189 | GAG-RELATED PROTEIN |
| Paelopatides46190 | TRANSPOSON |
| Paelopatides46191 | |
| Paelopatides46192 | PROTEIN PHOSPHATASE 2C |
| Paelopatides46193 | PROTEIN CBG26694 |
| Paelopatides46194 | PROTEIN CBG26694 |
| Paelopatides46195 | |
| Paelopatides46196 | TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN |
| Paelopatides46197 | TARGETING PROTEIN FOR XKLP2 |
| Paelopatides46198 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides46199 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides46200 | - |
| Paelopatides46201 | FLAP ENDONUCLEASE FAMILY MEMBER |
| Paelopatides46202 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46203 | |
| Paelopatides46204 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
