The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides45944 | |
Paelopatides45945 | ARMADILLO-TYPE FOLD-RELATED |
Paelopatides45946 | |
Paelopatides45947 | |
Paelopatides45948 | LEUCINE ZIPPER PROTEIN 4-RELATED |
Paelopatides45949 | DYNAMIN |
Paelopatides45950 | |
Paelopatides45951 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45952 | |
Paelopatides45953 | |
Paelopatides45954 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides45955 | ENDONUCLEASE |
Paelopatides45956 | FI21225P1 |
Paelopatides45957 | |
Paelopatides45958 | POL PROTEIN |
Paelopatides45959 | ENDONUCLEASE-RELATED |
Paelopatides45960 | CHROMOSOME ALIGNMENT-MAINTAINING PHOSPHOPROTEIN 1 |
Paelopatides45961 | FI21225P1 |
Paelopatides45962 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 |
Paelopatides45963 | WINS1, 2 PROTEIN |
Paelopatides45964 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Paelopatides45965 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Paelopatides45966 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45967 | |
Paelopatides45968 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
Paelopatides45969 | |
Paelopatides45970 | ENDONUCLEASE-RELATED |
Paelopatides45971 | POL PROTEIN |
Paelopatides45972 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides45973 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides45974 | |
Paelopatides45975 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
Paelopatides45976 | |
Paelopatides45977 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45978 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides45979 | XK-RELATED PROTEIN |
Paelopatides45980 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45981 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
Paelopatides45982 | TEKTIN |
Paelopatides45983 | AD039 HT014 THIOREDOXIN FAMILY TRP26 |
Paelopatides45984 | |
Paelopatides45985 | AD039 HT014 THIOREDOXIN FAMILY TRP26 |
Paelopatides45987 | UPF0147 PROTEIN MJ1419 |
Paelopatides45988 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Paelopatides45989 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Paelopatides45990 | |
Paelopatides45991 | |
Paelopatides45992 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45993 | PROTEIN STPG4 |
Paelopatides45994 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |