The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides45626 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides45627 | |
| Paelopatides45628 | PROTEIN CBG26694 |
| Paelopatides45629 | |
| Paelopatides45630 | SLR5058 PROTEIN |
| Paelopatides45631 | CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN |
| Paelopatides45632 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides45633 | |
| Paelopatides45634 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45635 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45636 | MEIOTIC RECOMBINATION PROTEIN SPO11 |
| Paelopatides45640 | TRANSPOSON |
| Paelopatides45641 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Paelopatides45642 | UNCHARACTERIZED |
| Paelopatides45643 | UNCHARACTERIZED |
| Paelopatides45644 | UNCHARACTERIZED |
| Paelopatides45645 | CYTOCHROME P450 FAMILY 1 |
| Paelopatides45651 | |
| Paelopatides45652 | ENDONUCLEASE-RELATED |
| Paelopatides45653 | ASPARTYL PROTEASE DDI-RELATED |
| Paelopatides45654 | |
| Paelopatides45655 | PROTEIN CBG26694 |
| Paelopatides45656 | PROTEIN CBG26694 |
| Paelopatides45657 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides45658 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides45659 | |
| Paelopatides45660 | |
| Paelopatides45661 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides45662 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| Paelopatides45663 | CONTACTIN 5 |
| Paelopatides45664 | |
| Paelopatides45665 | MEMBRANE COMPONENT OF ABC TRANSPORTER YHHJ-RELATED |
| Paelopatides45666 | |
| Paelopatides45667 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides45668 | SOLUTE CARRIER FAMILY 35 MEMBER B |
| Paelopatides45669 | |
| Paelopatides45670 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| Paelopatides45671 | CELL SURFACE GLYCOPROTEIN MUC18-RELATED |
| Paelopatides45672 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides45673 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| Paelopatides45674 | |
| Paelopatides45675 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides45676 | |
| Paelopatides45677 | |
| Paelopatides45678 | |
| Paelopatides45679 | |
| Paelopatides45680 | |
| Paelopatides45681 | BUCENTAUR RELATED |
| Paelopatides45682 | REVERSE TRANSCRIPTASES |
| Paelopatides45683 | CYTOCHROME P450 FAMILY 3 |
