The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides45313 | |
| Paelopatides45314 | MONOACYLGLYCEROL LIPASE |
| Paelopatides45315 | EPOXIDE HYDROLASE |
| Paelopatides45316 | MONOACYLGLYCEROL LIPASE |
| Paelopatides45317 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| Paelopatides45318 | |
| Paelopatides45319 | |
| Paelopatides45320 | |
| Paelopatides45321 | |
| Paelopatides45322 | |
| Paelopatides45323 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
| Paelopatides45324 | |
| Paelopatides45325 | |
| Paelopatides45326 | |
| Paelopatides45329 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides45330 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| Paelopatides45331 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| Paelopatides45332 | |
| Paelopatides45333 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides45334 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45335 | DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG |
| Paelopatides45336 | HMG DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides45337 | |
| Paelopatides45338 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
| Paelopatides45339 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45340 | UNCHARACTERIZED |
| Paelopatides45341 | |
| Paelopatides45342 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| Paelopatides45343 | FACIOGENITAL DYSPLASIA PROTEIN |
| Paelopatides45344 | FACIOGENITAL DYSPLASIA PROTEIN |
| Paelopatides45345 | SI:CH211-196P9.1-RELATED |
| Paelopatides45346 | NUCLEAR FUSION PROTEIN FUS2 |
| Paelopatides45347 | |
| Paelopatides45348 | |
| Paelopatides45349 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45350 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER |
| Paelopatides45351 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER |
| Paelopatides45352 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER |
| Paelopatides45353 | UNCHARACTERIZED |
| Paelopatides45354 | |
| Paelopatides45355 | |
| Paelopatides45356 | LEUCINE-RICH REPEAT-CONTAINING |
| Paelopatides45357 | |
| Paelopatides45358 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides45359 | |
| Paelopatides45360 | UNCHARACTERIZED |
| Paelopatides45361 | PROTEIN CBG07384 |
| Paelopatides45362 | NUCLEOLAR RNA-ASSOCIATED PROTEIN |
| Paelopatides45363 | NUCLEOLAR RNA-ASSOCIATED PROTEIN |
| Paelopatides45364 | NUCLEOLAR RNA-ASSOCIATED PROTEIN |
