The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides45415 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides45416 | |
Paelopatides45417 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides45418 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45419 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides45420 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides45421 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides45422 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
Paelopatides45423 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides45424 | |
Paelopatides45427 | PROTEIN ARGININE N-METHYLTRANSFERASE 5 |
Paelopatides45428 | |
Paelopatides45429 | |
Paelopatides45430 | |
Paelopatides45431 | IP13529P |
Paelopatides45432 | SI:CH211-196P9.1-RELATED |
Paelopatides45433 | PROTEIN, PUTATIVE-RELATED |
Paelopatides45434 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45435 | SOLUTE CARRIER FAMILY 22 MEMBER |
Paelopatides45436 | UNC-93 RELATED |
Paelopatides45437 | GTP-BINDING |
Paelopatides45438 | |
Paelopatides45439 | GTP-BINDING |
Paelopatides45440 | |
Paelopatides45441 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
Paelopatides45442 | |
Paelopatides45443 | HISTONE ACETYLTRANSFERASE |
Paelopatides45444 | HISTONE ACETYLTRANSFERASE |
Paelopatides45445 | ARGININE OR CREATINE KINASE |
Paelopatides45446 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
Paelopatides45447 | FAM98 |
Paelopatides45448 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
Paelopatides45449 | - |
Paelopatides45450 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides45451 | - |
Paelopatides45452 | CENTROSOMAL PROTEIN OF 76 KDA |
Paelopatides45453 | FLAVIN MONOAMINE OXIDASE |
Paelopatides45454 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL |
Paelopatides45455 | FLAVIN MONOAMINE OXIDASE |
Paelopatides45456 | |
Paelopatides45457 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Paelopatides45458 | NETRIN RECEPTOR UNC5 |
Paelopatides45459 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides45460 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides45461 | RETROTRANSPOSON |
Paelopatides45462 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides45463 | |
Paelopatides45464 | |
Paelopatides45465 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides45466 |