The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides45158 | |
| Paelopatides45159 | CONDENSIN |
| Paelopatides45160 | CONDENSIN |
| Paelopatides45161 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides45162 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides45163 | CONDENSIN |
| Paelopatides45164 | |
| Paelopatides45165 | RETROTRANSPOSON |
| Paelopatides45166 | RETROTRANSPOSON |
| Paelopatides45167 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
| Paelopatides45168 | |
| Paelopatides45169 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
| Paelopatides45170 | |
| Paelopatides45171 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides45172 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides45173 | NADH-CYTOCHROME B5 REDUCTASE |
| Paelopatides45174 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides45175 | NETRIN RECEPTOR UNC5 |
| Paelopatides45176 | |
| Paelopatides45177 | |
| Paelopatides45178 | |
| Paelopatides45179 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides45180 | METABOTROPIC GLUTAMATE RECEPTOR |
| Paelopatides45181 | |
| Paelopatides45182 | |
| Paelopatides45183 | |
| Paelopatides45184 | |
| Paelopatides45185 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| Paelopatides45186 | |
| Paelopatides45187 | SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1 |
| Paelopatides45188 | IMMUNOGLOBULIN |
| Paelopatides45189 | IMMUNOGLOBULIN |
| Paelopatides45190 | TITIN |
| Paelopatides45191 | CONTACTIN 5 |
| Paelopatides45192 | IMMUNOGLOBULIN |
| Paelopatides45193 | BASIGIN RELATED |
| Paelopatides45194 | BASIGIN RELATED |
| Paelopatides45195 | |
| Paelopatides45196 | PROTEIN SIDEKICK |
| Paelopatides45197 | IMMUNOGLOBULIN |
| Paelopatides45198 | IMMUNOGLOBULIN |
| Paelopatides45199 | |
| Paelopatides45201 | IMMUNOGLOBULIN |
| Paelopatides45202 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| Paelopatides45203 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| Paelopatides45204 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| Paelopatides45205 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| Paelopatides45206 | |
| Paelopatides45207 | IMMUNOGLOBULIN |
| Paelopatides45208 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
