The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides44905 | |
| Paelopatides44906 | |
| Paelopatides44907 | |
| Paelopatides44908 | |
| Paelopatides44909 | |
| Paelopatides44910 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44911 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44912 | |
| Paelopatides44913 | |
| Paelopatides44914 | L-GULONOLACTONE OXIDASE |
| Paelopatides44915 | UBIQUITIN-CONJUGATING ENZYME E2 |
| Paelopatides44916 | |
| Paelopatides44917 | VPRBP PROTEIN-RELATED |
| Paelopatides44918 | |
| Paelopatides44919 | VPRBP PROTEIN-RELATED |
| Paelopatides44920 | TRANSMEMBRANE PROTEIN 121B |
| Paelopatides44921 | TRANSMEMBRANE PROTEIN 121B |
| Paelopatides44922 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides44923 | NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER |
| Paelopatides44924 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| Paelopatides44925 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides44926 | PROTEIN CBG26694 |
| Paelopatides44927 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44928 | CADHERIN-23 |
| Paelopatides44929 | |
| Paelopatides44930 | |
| Paelopatides44931 | CAMK FAMILY PROTEIN KINASE |
| Paelopatides44932 | |
| Paelopatides44933 | |
| Paelopatides44934 | SORBITOL DEHYDROGENASE |
| Paelopatides44935 | REVERSE TRANSCRIPTASE |
| Paelopatides44936 | |
| Paelopatides44937 | |
| Paelopatides44938 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44939 | SI:CH211-196P9.1-RELATED |
| Paelopatides44940 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Paelopatides44941 | |
| Paelopatides44942 | |
| Paelopatides44943 | |
| Paelopatides44944 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides44945 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides44946 | ENDONUCLEASE |
| Paelopatides44947 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED |
| Paelopatides44948 | PROTEIN CBG26694 |
| Paelopatides44949 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides44950 | |
| Paelopatides44951 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides44952 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| Paelopatides44953 | |
| Paelopatides44954 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
