The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides44588 | - |
| Paelopatides44589 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides44590 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| Paelopatides44591 | |
| Paelopatides44592 | |
| Paelopatides44593 | RUS1 FAMILY PROTEIN C16ORF58 |
| Paelopatides44594 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides44595 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides44596 | |
| Paelopatides44597 | ANNEXIN |
| Paelopatides44598 | BONUS, ISOFORM C-RELATED |
| Paelopatides44599 | |
| Paelopatides44600 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44601 | ALDO/KETO REDUCTASE |
| Paelopatides44602 | PROTEIN CBG16428 |
| Paelopatides44603 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides44604 | ADP-RIBOSYL CYCLASE |
| Paelopatides44605 | LDOC1 RELATED |
| Paelopatides44606 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides44607 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides44608 | |
| Paelopatides44609 | DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED |
| Paelopatides44610 | ENDONUCLEASE-RELATED |
| Paelopatides44611 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides44612 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides44613 | PARANEOPLASTIC ANTIGEN |
| Paelopatides44614 | |
| Paelopatides44615 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides44616 | |
| Paelopatides44617 | EAP30 SUBUNIT OF ELL COMPLEX |
| Paelopatides44618 | NOTCH LIGAND FAMILY MEMBER |
| Paelopatides44619 | NOTCH LIGAND FAMILY MEMBER |
| Paelopatides44620 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44621 | THAP DOMAIN PROTEIN |
| Paelopatides44622 | |
| Paelopatides44623 | PROTEIN CBG26694 |
| Paelopatides44624 | AGAP007537-PB |
| Paelopatides44625 | NETRIN RECEPTOR UNC5 |
| Paelopatides44626 | |
| Paelopatides44631 | MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT |
| Paelopatides44632 | |
| Paelopatides44633 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides44634 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides44635 | |
| Paelopatides44636 | |
| Paelopatides44637 | |
| Paelopatides44638 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44639 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44641 | PROTEIN QUA-1-RELATED |
| Paelopatides44642 | GTPASE, IMAP FAMILY MEMBER-RELATED |
