The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides44437 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
Paelopatides44438 | - |
Paelopatides44439 | RABCONNECTIN-3B, ISOFORM A |
Paelopatides44440 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44441 | WD-40 REPEAT PROTEIN |
Paelopatides44442 | 39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL |
Paelopatides44443 | PROTEIN CBG26694 |
Paelopatides44444 | PARANEOPLASTIC ANTIGEN |
Paelopatides44445 | |
Paelopatides44446 | |
Paelopatides44447 | |
Paelopatides44448 | |
Paelopatides44449 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Paelopatides44450 | 4-NITROPHENYLPHOSPHATASE-RELATED |
Paelopatides44451 | |
Paelopatides44452 | |
Paelopatides44453 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
Paelopatides44454 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides44455 | FIBRINOGEN ALPHA CHAIN |
Paelopatides44456 | |
Paelopatides44457 | |
Paelopatides44458 | |
Paelopatides44459 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
Paelopatides44460 | ZGC:195170 |
Paelopatides44461 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides44462 | ZGC:195170 |
Paelopatides44463 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44464 | ENDONUCLEASE-RELATED |
Paelopatides44465 | PROTEIN CBG26694 |
Paelopatides44466 | BUCENTAUR RELATED |
Paelopatides44467 | BUCENTAUR RELATED |
Paelopatides44468 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44469 | |
Paelopatides44470 | PROTEIN CBG26694 |
Paelopatides44471 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides44472 | |
Paelopatides44473 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
Paelopatides44474 | |
Paelopatides44475 | |
Paelopatides44476 | CELL DIVISION CONTROL PROTEIN 6-RELATED |
Paelopatides44477 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides44478 | UROCANATE HYDRATASE |
Paelopatides44479 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides44480 | |
Paelopatides44481 | RNA LARIAT DEBRANCHING ENZYME |
Paelopatides44483 | |
Paelopatides44484 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44485 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
Paelopatides44486 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides44487 | CYTOCHROME P450 508A4-RELATED |