The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides44488 | M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL |
Paelopatides44489 | |
Paelopatides44490 | |
Paelopatides44491 | |
Paelopatides44492 | |
Paelopatides44493 | |
Paelopatides44494 | LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6 |
Paelopatides44495 | TBP-1 INTERACTING PROTEIN |
Paelopatides44496 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides44497 | ZINC FINGER RNA-BINDING PROTEIN |
Paelopatides44498 | - |
Paelopatides44499 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides44500 | REVERSE TRANSCRIPTASES |
Paelopatides44501 | WDR41-RELATED |
Paelopatides44502 | ACETYLTRANSFERASE |
Paelopatides44503 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
Paelopatides44504 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides44505 | PROTEIN CBG26694 |
Paelopatides44506 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides44507 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides44508 | STG PROTEIN |
Paelopatides44509 | |
Paelopatides44510 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44511 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides44512 | |
Paelopatides44513 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides44514 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides44515 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
Paelopatides44516 | |
Paelopatides44517 | |
Paelopatides44518 | |
Paelopatides44519 | HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS |
Paelopatides44520 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
Paelopatides44521 | SLR5058 PROTEIN |
Paelopatides44522 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
Paelopatides44523 | ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 |
Paelopatides44524 | |
Paelopatides44525 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
Paelopatides44526 | PEPTIDYLPROLYL ISOMERASE |
Paelopatides44527 | KU AUTOANTIGEN DNA HELICASE |
Paelopatides44528 | THYMIDYLATE SYNTHASE 1 |
Paelopatides44529 | THYMIDYLATE SYNTHASE 1 |
Paelopatides44530 | THYMIDYLATE SYNTHASE 1 |
Paelopatides44531 | |
Paelopatides44532 | |
Paelopatides44533 | TETRATRICOPEPTIDE REPEAT PROTEIN 12 |
Paelopatides44534 | |
Paelopatides44535 | |
Paelopatides44536 | |
Paelopatides44537 |