The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides44171 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides44172 | BTB POZ DOMAIN CONTAINING 12 |
Paelopatides44173 | PROTEIN CBG26694 |
Paelopatides44174 | PROTEIN CBG26694 |
Paelopatides44175 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides44176 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides44177 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Paelopatides44178 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Paelopatides44179 | |
Paelopatides44180 | |
Paelopatides44181 | PROTEIN CBG26694 |
Paelopatides44182 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides44183 | PROTEIN CBG26694 |
Paelopatides44184 | PROTEIN CBG23806 |
Paelopatides44185 | |
Paelopatides44186 | AGAP008170-PA |
Paelopatides44187 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides44188 | |
Paelopatides44189 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44191 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44192 | LEUCINE ZIPPER PROTEIN 4-RELATED |
Paelopatides44193 | DEDICATOR OF CYTOKINESIS DOCK |
Paelopatides44194 | PROTEIN CBG26694 |
Paelopatides44195 | PARANEOPLASTIC ANTIGEN |
Paelopatides44196 | |
Paelopatides44197 | ZINC FINGER PROTEIN 142 |
Paelopatides44198 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44199 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44200 | FLAGELLAR RADIAL SPOKE PROTEIN 3 |
Paelopatides44201 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44202 | FERREDOXIN/ADRENODOXIN |
Paelopatides44205 | |
Paelopatides44206 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides44207 | |
Paelopatides44208 | ATP-DEPENDENT DNA HELICASE |
Paelopatides44209 | ATP-DEPENDENT DNA HELICASE |
Paelopatides44210 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides44211 | |
Paelopatides44212 | BETA-1,4-GALACTOSYLTRANSFERASE |
Paelopatides44213 | |
Paelopatides44214 | |
Paelopatides44215 | |
Paelopatides44216 | PROTEIN CBG26694 |
Paelopatides44217 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44218 | |
Paelopatides44220 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
Paelopatides44221 | PEPTIDE METHIONINE SULFOXIDE REDUCTASE |
Paelopatides44222 | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR |
Paelopatides44224 | RIBOSOMAL RNA METHYLTRANSFERASE |
Paelopatides44225 | FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |