The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides44335 | TESTIS-EXPRESSED PROTEIN 11 |
Paelopatides44336 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides44337 | |
Paelopatides44338 | PIKACHURIN-LIKE PROTEIN |
Paelopatides44339 | |
Paelopatides44340 | CELL DIVISION PROTEIN KINASE |
Paelopatides44341 | |
Paelopatides44342 | UNCHARACTERIZED |
Paelopatides44343 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44344 | REVERSE TRANSCRIPTASES |
Paelopatides44345 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44346 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides44347 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides44348 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Paelopatides44349 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides44350 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides44351 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 |
Paelopatides44352 | BRCA1-ASSOCIATED PROTEIN |
Paelopatides44353 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Paelopatides44354 | |
Paelopatides44355 | |
Paelopatides44356 | APOLIPOPROTEIN L |
Paelopatides44357 | PROTEIN CBG26694 |
Paelopatides44358 | POL PROTEIN |
Paelopatides44359 | |
Paelopatides44360 | |
Paelopatides44361 | |
Paelopatides44362 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Paelopatides44363 | |
Paelopatides44364 | |
Paelopatides44365 | ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 |
Paelopatides44366 | |
Paelopatides44367 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44368 | |
Paelopatides44369 | |
Paelopatides44370 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides44371 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides44372 | TYROSINE-PROTEIN KINASE |
Paelopatides44373 | |
Paelopatides44374 | |
Paelopatides44375 | TYROSINE-PROTEIN KINASE |
Paelopatides44376 | |
Paelopatides44377 | |
Paelopatides44378 | INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS |
Paelopatides44379 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54 |
Paelopatides44380 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54 |
Paelopatides44381 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54 |
Paelopatides44383 | |
Paelopatides44384 | HL07962P-RELATED |
Paelopatides44385 | SI:CH211-196P9.1-RELATED |