About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44284ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44285
Paelopatides44286
Paelopatides44287SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides44288PROTEIN EVA-1
Paelopatides44289PROTEIN, PUTATIVE-RELATED
Paelopatides44290BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides44291ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44292TRANSPOSON
Paelopatides44293
Paelopatides44294
Paelopatides44295E3 UBIQUITIN-PROTEIN LIGASE MIB2
Paelopatides44296RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides44297
Paelopatides44298PHEROMONE SHUTDOWN PROTEIN
Paelopatides44299REELIN
Paelopatides44300REELIN
Paelopatides44301ORIGIN RECOGNITION COMPLEX SUBUNIT 5
Paelopatides44302RNA METHYLTRANSFERASE
Paelopatides44303OLIGOPEPTIDE TRANSPORTER-RELATED
Paelopatides44304FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44305FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44306REVERSE TRANSCRIPTASES
Paelopatides44307F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44308
Paelopatides44309FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44310REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44311BUCENTAUR RELATED
Paelopatides44312REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44313PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides44314GTP-BINDING
Paelopatides44315REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44316FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44317
Paelopatides44318
Paelopatides44319RETINOIC ACID-INDUCED PROTEIN 2
Paelopatides44320P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN
Paelopatides44321P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN
Paelopatides44322
Paelopatides44323NADPH OXIDASE
Paelopatides44324HOMOGENTISATE 1,2-DIOXYGENASE
Paelopatides44325RWD DOMAIN-CONTAINING PROTEIN
Paelopatides44327PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides44328ANKYRIN REPEAT PROTEIN
Paelopatides44329
Paelopatides44330PROTEIN CBG26694
Paelopatides44331TESTIS EXPRESSED 11
Paelopatides44332
Paelopatides44333
Paelopatides44334APOPTOGENIC PROTEIN 1, MITOCHONDRIAL
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