About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44386
Paelopatides44387CYTOCHROME P450 508A4-RELATED
Paelopatides44388
Paelopatides44389ATP-DEPENDENT DNA HELICASE
Paelopatides44390L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides44391
Paelopatides44392CALCIUM-BINDING PROTEIN 8-RELATED
Paelopatides44393SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44394G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides44395ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44396ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides44397
Paelopatides44398NETRIN RECEPTOR UNC5
Paelopatides44399
Paelopatides44400-
Paelopatides44401SCAVENGER RECEPTOR CLASS F
Paelopatides44402REVERSE TRANSCRIPTASES
Paelopatides44403
Paelopatides44404ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44405PROTEIN CBG26694
Paelopatides44406
Paelopatides44407ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44408REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44409SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44410PROTEIN CBG26694
Paelopatides44411MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44412MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44413
Paelopatides44414
Paelopatides44415ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides44416PROTEIN CBG26694
Paelopatides44417REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44418UNCHARACTERIZED
Paelopatides44419PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44420
Paelopatides44421EG:EG0003.4 PROTEIN-RELATED
Paelopatides44422SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides44423ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides44424FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44426G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
Paelopatides44427GAG-RELATED PROTEIN
Paelopatides44428
Paelopatides44429
Paelopatides44430
Paelopatides44431TRANSMEMBRANE CHANNEL-RELATED
Paelopatides44432PARANEOPLASTIC ANTIGEN
Paelopatides44433POL PROTEIN
Paelopatides44434ENDONUCLEASE-RELATED
Paelopatides44435PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides44436NEUROPEPTIDES RECEPTOR
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