About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44538REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44539BUCENTAUR RELATED
Paelopatides44540ALPHA-MANNOSIDASE
Paelopatides44541PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44542GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides44543PITUITARY HOMEOBOX HOMOLOG PTX1
Paelopatides44544PITUITARY HOMEOBOX HOMOLOG PTX1
Paelopatides44545REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44546BUCENTAUR RELATED
Paelopatides44547AGAP005574-PA
Paelopatides44548
Paelopatides44549ACONITATE HYDRATASE B
Paelopatides44550HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides44551HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides44552
Paelopatides44553AMINE OXIDASE
Paelopatides44554LEUCINE-RICH REPEAT-CONTAINING
Paelopatides44555PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE
Paelopatides44556IFT140/172-RELATED
Paelopatides44557IFT140/172-RELATED
Paelopatides44558FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44559FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44560FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44561FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44562PA-PL1 PHOSPHOLIPASE FAMILY
Paelopatides44563
Paelopatides44564BUCENTAUR RELATED
Paelopatides44565BUCENTAUR RELATED
Paelopatides44566OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Paelopatides44567PROTEIN CBG26694
Paelopatides44568PARANEOPLASTIC ANTIGEN
Paelopatides44569
Paelopatides44570
Paelopatides44571REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44572REVERSE TRANSCRIPTASES
Paelopatides44573
Paelopatides44574
Paelopatides44575ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides44576
Paelopatides44577REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44578
Paelopatides44579REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44580
Paelopatides44581
Paelopatides445825'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT
Paelopatides44583PEROXIREDOXIN
Paelopatides445842-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE
Paelopatides44585RETROTRANSPOSON
Paelopatides44586RETROTRANSPOSON
Paelopatides44587PHD-TYPE DOMAIN-CONTAINING PROTEIN
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