About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44695BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides44696OS06G0237300 PROTEIN
Paelopatides44697
Paelopatides44698CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Paelopatides44699-
Paelopatides44700
Paelopatides44701
Paelopatides44702UPF0193 PROTEIN EVG1
Paelopatides44703ALCOHOL DEHYDROGENASE 1-RELATED
Paelopatides44704ALCOHOL DEHYDROGENASE 1-RELATED
Paelopatides44705ENZYMATIC POLYPROTEIN-RELATED
Paelopatides44706TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides44707PKSB
Paelopatides44708
Paelopatides44709RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
Paelopatides44710RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Paelopatides44711RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Paelopatides44712
Paelopatides44713REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44714PKSB
Paelopatides44715LP04239P
Paelopatides44716RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
Paelopatides44717
Paelopatides44718FI04643P-RELATED
Paelopatides44719
Paelopatides44720
Paelopatides44721CELL SURFACE GLYCOPROTEIN MUC18-RELATED
Paelopatides44722
Paelopatides44723INHIBITOR OF APOPTOSIS
Paelopatides44724DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides44725
Paelopatides44730PORCUPINE
Paelopatides44731PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44732
Paelopatides44734FI04643P-RELATED
Paelopatides44735TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides44736TRANSAMIDASE
Paelopatides44737TRANSPOSABLE ELEMENT-RELATED
Paelopatides44738RIBOSOMAL PROTEIN S6 KINASE
Paelopatides44739RIBOSOMAL PROTEIN S6 KINASE
Paelopatides44740
Paelopatides44741NGD5/OSM-6/IFT52
Paelopatides44742
Paelopatides44743PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44744
Paelopatides44745INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides44746SHC TRANSFORMING PROTEIN
Paelopatides44747SHC TRANSFORMING PROTEIN
Paelopatides44748ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44749REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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