The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides44801 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides44802 | |
| Paelopatides44803 | |
| Paelopatides44804 | |
| Paelopatides44805 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides44806 | POL PROTEIN |
| Paelopatides44807 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides44808 | |
| Paelopatides44809 | |
| Paelopatides44810 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| Paelopatides44811 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides44812 | |
| Paelopatides44813 | |
| Paelopatides44814 | LEUCINE-RICH REPEAT-CONTAINING |
| Paelopatides44815 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| Paelopatides44816 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| Paelopatides44817 | CALCIUM BINDING PROTEIN |
| Paelopatides44818 | NUCLEOSIDE DIPHOSPHATE KINASE |
| Paelopatides44819 | SORTING NEXIN |
| Paelopatides44820 | SORTING NEXIN |
| Paelopatides44821 | |
| Paelopatides44822 | UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN |
| Paelopatides44823 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| Paelopatides44824 | PEPTIDYLPROLYL ISOMERASE |
| Paelopatides44825 | FANCONI ANEMIA GROUP B PROTEIN |
| Paelopatides44826 | RCG42593, ISOFORM CRA_A |
| Paelopatides44827 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
| Paelopatides44829 | |
| Paelopatides44830 | PROTEIN CBG26694 |
| Paelopatides44831 | PROTEIN CBG26694 |
| Paelopatides44832 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides44833 | POL PROTEIN |
| Paelopatides44834 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44835 | |
| Paelopatides44836 | SI:CH211-196P9.1-RELATED |
| Paelopatides44837 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides44838 | NEPHRIN |
| Paelopatides44839 | |
| Paelopatides44840 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 |
| Paelopatides44841 | |
| Paelopatides44842 | |
| Paelopatides44843 | ZGC:195170 |
| Paelopatides44844 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides44845 | ZINC FINGER PROTEIN |
| Paelopatides44846 | SUZ DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides44847 | NOTCH LIGAND FAMILY MEMBER |
| Paelopatides44848 | PROTEASE M1 ZINC METALLOPROTEASE |
| Paelopatides44851 | |
| Paelopatides44852 | |
| Paelopatides44853 |
