The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides44750 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44751 | |
| Paelopatides44752 | OS05G0424000 PROTEIN-RELATED |
| Paelopatides44753 | CARNITINE O-ACYLTRANSFERASE |
| Paelopatides44754 | |
| Paelopatides44755 | BCL-2 RELATED |
| Paelopatides44756 | SPLICING FACTOR YJU2 |
| Paelopatides44757 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides44758 | BONUS, ISOFORM C-RELATED |
| Paelopatides44759 | SCAVENGER RECEPTOR CLASS F |
| Paelopatides44760 | |
| Paelopatides44761 | ADENYLOSUCCINATE SYNTHETASE |
| Paelopatides44762 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44763 | |
| Paelopatides44765 | |
| Paelopatides44766 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
| Paelopatides44767 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
| Paelopatides44768 | L-GULONOLACTONE OXIDASE |
| Paelopatides44769 | L-GULONOLACTONE OXIDASE |
| Paelopatides44770 | |
| Paelopatides44771 | CYTOCHROME P450 FAMILY 1 |
| Paelopatides44772 | HEME-BINDING MONOOXYGENASE FAMILY |
| Paelopatides44773 | |
| Paelopatides44774 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides44775 | REVERSE TRANSCRIPTASES |
| Paelopatides44776 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| Paelopatides44777 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| Paelopatides44778 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides44779 | RETROTRANSPOSON |
| Paelopatides44780 | RETROTRANSPOSON |
| Paelopatides44781 | |
| Paelopatides44782 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| Paelopatides44783 | PROTEIN CBG26694 |
| Paelopatides44784 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| Paelopatides44785 | |
| Paelopatides44786 | |
| Paelopatides44787 | |
| Paelopatides44788 | |
| Paelopatides44789 | CYTOCHROME P450 508A4-RELATED |
| Paelopatides44790 | FUMARATE HYDRATASE-RELATED |
| Paelopatides44791 | MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 |
| Paelopatides44792 | 3BP-1 RELATED RHOGAP |
| Paelopatides44793 | ENDONUCLEASE-RELATED |
| Paelopatides44794 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides44795 | CHROMOSOME 16 OPEN READING FRAME 96 |
| Paelopatides44796 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| Paelopatides44797 | |
| Paelopatides44798 | |
| Paelopatides44799 | |
| Paelopatides44800 | SI:CH211-108C17.2-RELATED-RELATED |
