The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43960 | PROTEIN CBG26694 |
| Paelopatides43961 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43962 | |
| Paelopatides43963 | PROTEIN CBG26694 |
| Paelopatides43964 | RETROTRANSPOSON |
| Paelopatides43965 | RETROTRANSPOSON |
| Paelopatides43966 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43968 | |
| Paelopatides43976 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| Paelopatides43977 | ACYLTRANSFERASE |
| Paelopatides43978 | ACYLTRANSFERASE |
| Paelopatides43979 | |
| Paelopatides43980 | TRANSLATION INITIATION FACTOR-RELATED |
| Paelopatides43981 | |
| Paelopatides43982 | 39S RIBOSOMAL PROTEIN L14, MITOCHONDRIAL |
| Paelopatides43983 | YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN |
| Paelopatides43984 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| Paelopatides43985 | |
| Paelopatides43986 | XANTHINE DEHYDROGENASE |
| Paelopatides43987 | DNA POLYMERASE EPSILON SUBUNIT B |
| Paelopatides43988 | CRUMBS FAMILY MEMBER |
| Paelopatides43989 | |
| Paelopatides43990 | COILIN |
| Paelopatides43991 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| Paelopatides43992 | |
| Paelopatides43993 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43994 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43995 | |
| Paelopatides43996 | PROTEIN ODR-4 HOMOLOG |
| Paelopatides43997 | PROTEIN ODR-4 HOMOLOG |
| Paelopatides43998 | INTEGRATOR COMPLEX SUBUNIT 9 |
| Paelopatides43999 | THIAMIN PYROPHOSPHOKINASE |
| Paelopatides44000 | THIAMIN PYROPHOSPHOKINASE |
| Paelopatides44001 | METALLOPROTEASE TLDD |
| Paelopatides44002 | UNCHARACTERIZED |
| Paelopatides44003 | DYNEIN LIGHT CHAIN ROADBLOCK |
| Paelopatides44004 | DYNEIN LIGHT CHAIN ROADBLOCK |
| Paelopatides44005 | VACUOLAR ATP SYNTHASE SUBUNIT AC39 |
| Paelopatides44006 | ADENOSYLHOMOCYSTEINASE |
| Paelopatides44007 | ADENOSYLHOMOCYSTEINASE |
| Paelopatides44008 | ADENOSYLHOMOCYSTEINASE |
| Paelopatides44009 | |
| Paelopatides44010 | DNA HELICASE RECQ FAMILY MEMBER |
| Paelopatides44011 | PROTEIN CBG26694 |
| Paelopatides44012 | |
| Paelopatides44013 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides44014 | GTP-BINDING |
| Paelopatides44015 | |
| Paelopatides44016 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides44018 |
