The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43808 | KELCH PROTEIN |
| Paelopatides43809 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43810 | TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED |
| Paelopatides43811 | TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED |
| Paelopatides43812 | TRANSMEMBRANE PROTEIN 107 |
| Paelopatides43813 | |
| Paelopatides43814 | COATOMER |
| Paelopatides43815 | |
| Paelopatides43816 | |
| Paelopatides43817 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| Paelopatides43819 | DEDICATOR OF CYTOKINESIS DOCK |
| Paelopatides43820 | DEDICATOR OF CYTOKINESIS DOCK |
| Paelopatides43821 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides43822 | |
| Paelopatides43823 | NUCLEOTIDE KINASE |
| Paelopatides43824 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
| Paelopatides43825 | O-GLCNACASE |
| Paelopatides43826 | O-GLCNACASE |
| Paelopatides43827 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides43828 | O-GLCNACASE |
| Paelopatides43829 | |
| Paelopatides43830 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| Paelopatides43831 | |
| Paelopatides43832 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43833 | TYROSINE-PROTEIN KINASE |
| Paelopatides43834 | |
| Paelopatides43835 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides43836 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| Paelopatides43837 | |
| Paelopatides43838 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides43839 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides43840 | |
| Paelopatides43841 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides43842 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| Paelopatides43843 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| Paelopatides43844 | CALCIUM BINDING PROTEIN |
| Paelopatides43845 | |
| Paelopatides43846 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43847 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| Paelopatides43849 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43850 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43851 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43852 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43853 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides43854 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| Paelopatides43855 | |
| Paelopatides43856 | UNCHARACTERIZED HYPOTHALAMUS PROTEIN HT007 |
| Paelopatides43857 | FL(2)D-ASSOCIATED COMPLEX COMPONENT |
| Paelopatides43858 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43859 |
