The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43498 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43499 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65 |
| Paelopatides43500 | |
| Paelopatides43502 | |
| Paelopatides43503 | |
| Paelopatides43504 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| Paelopatides43505 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
| Paelopatides43506 | ARMADILLO REPEAT-CONTAINING PROTEIN 8 |
| Paelopatides43507 | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE |
| Paelopatides43508 | VILLIN |
| Paelopatides43509 | VILLIN |
| Paelopatides43510 | VILLIN |
| Paelopatides43511 | VILLIN |
| Paelopatides43512 | - |
| Paelopatides43513 | |
| Paelopatides43517 | SEQUESTOSOME 1-RELATED |
| Paelopatides43518 | |
| Paelopatides43519 | |
| Paelopatides43520 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43521 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides43522 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43523 | |
| Paelopatides43524 | |
| Paelopatides43525 | PERIAXIN/AHNAK |
| Paelopatides43526 | |
| Paelopatides43527 | |
| Paelopatides43528 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides43529 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
| Paelopatides43530 | POL PROTEIN |
| Paelopatides43531 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43532 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
| Paelopatides43533 | PROTEIN CBG26694 |
| Paelopatides43534 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43535 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides43536 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides43537 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides43538 | |
| Paelopatides43539 | NETRIN RECEPTOR UNC5 |
| Paelopatides43540 | |
| Paelopatides43541 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED |
| Paelopatides43542 | RAD9, HUS1, RAD1-INTERACTING NUCLEAR ORPHAN PROTEIN 1 |
| Paelopatides43543 | REVERSE TRANSCRIPTASES |
| Paelopatides43544 | FORKHEAD BOX PROTEIN J2 FAMILY MEMBER |
| Paelopatides43545 | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED |
| Paelopatides43547 | AGAP001464-PB |
| Paelopatides43548 | MIXED LINEAGE PROTEIN KINASE |
| Paelopatides43549 | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT |
| Paelopatides43550 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| Paelopatides43551 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides43552 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
