The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43553 | SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1 |
Paelopatides43554 | TRANSAMIDASE |
Paelopatides43555 | |
Paelopatides43556 | SENTRIN-SPECIFIC PROTEASE |
Paelopatides43557 | |
Paelopatides43558 | C21ORF13-RELATED |
Paelopatides43559 | PROTEIN CBG26694 |
Paelopatides43560 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides43561 | |
Paelopatides43562 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43563 | |
Paelopatides43564 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides43565 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides43566 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides43567 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides43568 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43569 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43570 | |
Paelopatides43571 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43572 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43573 | POTASSIUM CHANNEL, SUBFAMILY K |
Paelopatides43574 | PROTEIN NAKED CUTICLE |
Paelopatides43575 | HISTONE H2A |
Paelopatides43576 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
Paelopatides43577 | TRANSPOSON |
Paelopatides43578 | |
Paelopatides43579 | |
Paelopatides43580 | DNA2/NAM7 HELICASE FAMILY |
Paelopatides43581 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43582 | |
Paelopatides43583 | |
Paelopatides43584 | |
Paelopatides43585 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides43586 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides43587 | |
Paelopatides43588 | |
Paelopatides43589 | |
Paelopatides43590 | SINGLE STRANDED DNA BINDING PROTEIN |
Paelopatides43591 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides43592 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides43593 | OS08G0560600 PROTEIN |
Paelopatides43594 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 62-RELATED |
Paelopatides43595 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43598 | |
Paelopatides43599 | |
Paelopatides43600 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides43601 | RING FINGER PROTEIN 31-RELATED |
Paelopatides43602 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides43603 | GOLGI MEMBRANE PROTEIN YIP1 |
Paelopatides43604 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |