The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides43339 | REVERSE TRANSCRIPTASES |
| Paelopatides43340 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43341 | REVERSE TRANSCRIPTASES |
| Paelopatides43342 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43343 | REVERSE TRANSCRIPTASES |
| Paelopatides43344 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43345 | PROTEIN CBG26694 |
| Paelopatides43346 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides43347 | |
| Paelopatides43348 | |
| Paelopatides43349 | OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED |
| Paelopatides43350 | |
| Paelopatides43351 | UNCHARACTERIZED |
| Paelopatides43352 | |
| Paelopatides43353 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| Paelopatides43354 | |
| Paelopatides43355 | |
| Paelopatides43356 | |
| Paelopatides43357 | BONUS, ISOFORM C-RELATED |
| Paelopatides43358 | |
| Paelopatides43359 | PROTEIN CBG26694 |
| Paelopatides43360 | PROTEIN CBG26694 |
| Paelopatides43361 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides43362 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides43363 | |
| Paelopatides43364 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| Paelopatides43365 | METALLOPROTEASE |
| Paelopatides43366 | METALLOPROTEASE |
| Paelopatides43367 | |
| Paelopatides43368 | PRE-MRNA-SPLICING FACTOR ISY1 |
| Paelopatides43369 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides43370 | RETROTRANSPOSON |
| Paelopatides43371 | RETROTRANSPOSON |
| Paelopatides43372 | RAS-RELATED PROTEIN RAB |
| Paelopatides43373 | |
| Paelopatides43374 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD |
| Paelopatides43375 | |
| Paelopatides43376 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides43377 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides43378 | UBIQUITIN-ACTIVATING ENZYME E1 |
| Paelopatides43379 | |
| Paelopatides43380 | PROLINE-RICH PROTEIN PRCC |
| Paelopatides43381 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides43382 | |
| Paelopatides43383 | |
| Paelopatides43384 | |
| Paelopatides43386 | |
| Paelopatides43387 | |
| Paelopatides43388 | |
| Paelopatides43390 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
