The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43129 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43130 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43131 | |
Paelopatides43132 | |
Paelopatides43133 | ENDONUCLEASE-RELATED |
Paelopatides43134 | POL PROTEIN |
Paelopatides43135 | PARANEOPLASTIC ANTIGEN |
Paelopatides43136 | BCL9 |
Paelopatides43137 | VINCULIN |
Paelopatides43138 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43139 | VINCULIN |
Paelopatides43140 | |
Paelopatides43141 | |
Paelopatides43142 | |
Paelopatides43143 | TOUCAN, ISOFORM A |
Paelopatides43144 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43145 | |
Paelopatides43146 | |
Paelopatides43147 | ENDONUCLEASE-RELATED |
Paelopatides43148 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides43149 | |
Paelopatides43150 | |
Paelopatides43151 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides43152 | |
Paelopatides43153 | SI:CH211-196P9.1-RELATED |
Paelopatides43154 | SNF2/RAD54 HELICASE FAMILY |
Paelopatides43155 | |
Paelopatides43156 | |
Paelopatides43157 | CHORDIN |
Paelopatides43158 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT-ASSOCIATED REGULATORY PROTEIN |
Paelopatides43159 | GLUTATHIONE S-TRANSFERASE |
Paelopatides43160 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
Paelopatides43161 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
Paelopatides43162 | ATP-DEPENDENT RNA AND DNA HELICASE |
Paelopatides43163 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Paelopatides43164 | PROTEIN CBG26694 |
Paelopatides43165 | SOLUTE CARRIER FAMILY 35, MEMBER F5 |
Paelopatides43168 | - |
Paelopatides43169 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides43170 | JANUS-A/JANUS-B |
Paelopatides43171 | |
Paelopatides43172 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
Paelopatides43173 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43174 | ATP-DEPENDENT RNA HELICASE |
Paelopatides43175 | MIXED LINEAGE PROTEIN KINASE |
Paelopatides43176 | ATP-DEPENDENT RNA HELICASE DBP3 |
Paelopatides43177 | |
Paelopatides43178 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43179 | LITTLE ELONGATION COMPLEX SUBUNIT 2 |
Paelopatides43180 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |