The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43234 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Paelopatides43235 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Paelopatides43236 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Paelopatides43237 | 40S RIBOSOMAL PROTEIN S7 |
Paelopatides43238 | RIBONUCLEASE H1 |
Paelopatides43239 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides43240 | PROTEIN CBG03580 |
Paelopatides43241 | |
Paelopatides43242 | CCR4-NOT TRANSCRIPTION COMPLEX RELATED |
Paelopatides43243 | SODIUM CHANNEL MODIFIER 1 |
Paelopatides43244 | |
Paelopatides43245 | |
Paelopatides43246 | - |
Paelopatides43247 | REVERSE TRANSCRIPTASES |
Paelopatides43248 | |
Paelopatides43249 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43250 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43251 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43252 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
Paelopatides43253 | |
Paelopatides43254 | |
Paelopatides43255 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
Paelopatides43256 | |
Paelopatides43257 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43258 | NG5 |
Paelopatides43259 | GTP-BINDING |
Paelopatides43260 | OXYSTEROL-BINDING PROTEIN-RELATED |
Paelopatides43262 | POL PROTEIN |
Paelopatides43263 | ORGANIC ANION TRANSPORTER |
Paelopatides43264 | |
Paelopatides43265 | DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED |
Paelopatides43266 | AGAP002036-PA |
Paelopatides43267 | |
Paelopatides43268 | CALPAIN |
Paelopatides43269 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43270 | CHAPERONIN |
Paelopatides43271 | |
Paelopatides43272 | OS05G0310600 PROTEIN |
Paelopatides43273 | OS05G0310600 PROTEIN |
Paelopatides43274 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
Paelopatides43275 | |
Paelopatides43276 | |
Paelopatides43277 | PROTEIN CBG26694 |
Paelopatides43278 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides43279 | |
Paelopatides43280 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides43281 | PROTEIN CBG26694 |
Paelopatides43282 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43283 | |
Paelopatides43284 | APPLE DOMAIN-CONTAINING PROTEIN |