The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides43285 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides43286 | CYCLINS |
Paelopatides43287 | SODIUM/HYDROGEN EXCHANGER |
Paelopatides43288 | |
Paelopatides43289 | |
Paelopatides43290 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
Paelopatides43291 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
Paelopatides43292 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
Paelopatides43293 | |
Paelopatides43294 | |
Paelopatides43295 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
Paelopatides43296 | TYROSINE-PROTEIN KINASE |
Paelopatides43297 | |
Paelopatides43300 | ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2 |
Paelopatides43301 | |
Paelopatides43302 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Paelopatides43303 | |
Paelopatides43304 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Paelopatides43305 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides43306 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Paelopatides43307 | FI04487P |
Paelopatides43308 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43309 | BUCENTAUR RELATED |
Paelopatides43310 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides43312 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides43313 | ENDONUCLEASE |
Paelopatides43314 | SI:CH211-196P9.1-RELATED |
Paelopatides43315 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides43316 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43317 | 60S RIBOSOMAL PROTEIN L7 |
Paelopatides43318 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
Paelopatides43319 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE |
Paelopatides43320 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE |
Paelopatides43322 | SLEI FAMILY PROTEIN |
Paelopatides43323 | |
Paelopatides43324 | |
Paelopatides43325 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
Paelopatides43326 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides43327 | RAS-RELATED PROTEIN RAB |
Paelopatides43328 | |
Paelopatides43329 | DYNEIN LIGHT INTERMEDIATE CHAIN |
Paelopatides43330 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides43331 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides43332 | CYTOCHROME P450 FAMILY 4 |
Paelopatides43333 | - |
Paelopatides43334 | PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR |
Paelopatides43335 | PROTEIN CBG26694 |
Paelopatides43336 | |
Paelopatides43337 | |
Paelopatides43338 | BUCENTAUR RELATED |