About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides42971ENZYMATIC POLYPROTEIN-RELATED
Paelopatides42972TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides42973
Paelopatides42974FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides42975FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides42976FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides42977FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides42978PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides42979RETROTRANSPOSON
Paelopatides42980
Paelopatides42981
Paelopatides42982
Paelopatides42983OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides42984ODD-SKIPPED - RELATED
Paelopatides42985SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
Paelopatides42986NINEIN
Paelopatides42987KELCH DOMAIN-CONTAINING PROTEIN 3
Paelopatides42988
Paelopatides42989
Paelopatides42990REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42991
Paelopatides42992GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides42994HEDGEHOG
Paelopatides42995GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides42996
Paelopatides42997SI:CH211-196P9.1-RELATED
Paelopatides42998
Paelopatides42999
Paelopatides43000PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43001PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43002RETROTRANSPOSON
Paelopatides43003REVERSE TRANSCRIPTASES
Paelopatides43004REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides43005ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED
Paelopatides43006ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED
Paelopatides43007
Paelopatides43008REVERSE TRANSCRIPTASES
Paelopatides43009
Paelopatides43010TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2
Paelopatides43011AIG1-TYPE G DOMAIN-CONTAINING PROTEIN
Paelopatides43013NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides43014THYMIDYLATE KINASE
Paelopatides43015TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides43016
Paelopatides43017REVERSE TRANSCRIPTASE
Paelopatides43018
Paelopatides43019F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides43020PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43021PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides43022RETROTRANSPOSON
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