The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides42716 | RNA HELICASE |
| Paelopatides42717 | RNA POLYMERASE II CTD PHOSPHATASE |
| Paelopatides42718 | 28S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL |
| Paelopatides42719 | RNA-BINDING PROTEIN NOB1 |
| Paelopatides42720 | UNCHARACTERIZED |
| Paelopatides42721 | CASEIN KINASE II SUBUNIT ALPHA |
| Paelopatides42722 | ORF PROTEIN |
| Paelopatides42723 | |
| Paelopatides42724 | POL PROTEIN |
| Paelopatides42725 | |
| Paelopatides42726 | |
| Paelopatides42727 | |
| Paelopatides42728 | |
| Paelopatides42729 | RING FINGER PROTEIN 31-RELATED |
| Paelopatides42730 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| Paelopatides42731 | |
| Paelopatides42732 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| Paelopatides42733 | YIPPEE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42734 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42735 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| Paelopatides42736 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
| Paelopatides42737 | |
| Paelopatides42738 | BONUS, ISOFORM C-RELATED |
| Paelopatides42739 | |
| Paelopatides42740 | |
| Paelopatides42741 | G DOMAIN-CONTAINING PROTEIN |
| Paelopatides42742 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides42743 | SI:CH211-262H13.3-RELATED-RELATED |
| Paelopatides42744 | |
| Paelopatides42745 | PYRIDOXAL KINASE |
| Paelopatides42746 | PEST PROTEOLYTIC SIGNAL-CONTAINING NUCLEAR PROTEIN |
| Paelopatides42747 | |
| Paelopatides42748 | CENTROSOMAL PROTEIN OF 85 KDA |
| Paelopatides42749 | HOMEOBOX PROTEIN ARISTALESS |
| Paelopatides42750 | WSCD FAMILY MEMBER CG9164 |
| Paelopatides42751 | WSCD FAMILY MEMBER CG9164 |
| Paelopatides42752 | |
| Paelopatides42753 | |
| Paelopatides42754 | |
| Paelopatides42756 | POL PROTEIN |
| Paelopatides42757 | |
| Paelopatides42758 | PARANEOPLASTIC ANTIGEN |
| Paelopatides42759 | PROTEIN CBG26694 |
| Paelopatides42760 | |
| Paelopatides42761 | |
| Paelopatides42762 | |
| Paelopatides42763 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN |
| Paelopatides42764 | |
| Paelopatides42765 | |
| Paelopatides42766 |
