The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides42457 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42458 | |
| Paelopatides42459 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides42460 | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE |
| Paelopatides42461 | BUCENTAUR RELATED |
| Paelopatides42462 | G PROTEIN-COUPLED RECEPTOR |
| Paelopatides42463 | |
| Paelopatides42464 | DYNEIN HEAVY CHAIN |
| Paelopatides42465 | DYNEIN HEAVY CHAIN |
| Paelopatides42466 | DYNEIN HEAVY CHAIN |
| Paelopatides42467 | DYNEIN HEAVY CHAIN |
| Paelopatides42468 | DYNEIN HEAVY CHAIN |
| Paelopatides42469 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| Paelopatides42470 | ALPHA-GLUCOSIDASE |
| Paelopatides42471 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides42472 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides42473 | |
| Paelopatides42474 | |
| Paelopatides42475 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| Paelopatides42476 | AGAP008170-PA |
| Paelopatides42477 | |
| Paelopatides42478 | - |
| Paelopatides42479 | INTERFERON REGULATORY FACTOR |
| Paelopatides42480 | |
| Paelopatides42481 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| Paelopatides42483 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42484 | FANCONI-ASSOCIATED NUCLEASE 1 |
| Paelopatides42485 | |
| Paelopatides42486 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides42487 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42488 | 5'-NUCLEOTIDASE-RELATED |
| Paelopatides42489 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides42490 | TYROSINE-PROTEIN KINASE |
| Paelopatides42491 | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR |
| Paelopatides42492 | |
| Paelopatides42493 | PHOSPHOMANNOMUTASE 45A |
| Paelopatides42494 | HOMEOBOX PROTEIN HOX |
| Paelopatides42495 | |
| Paelopatides42496 | |
| Paelopatides42497 | |
| Paelopatides42499 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides42500 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides42501 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides42502 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42503 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| Paelopatides42504 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| Paelopatides42505 | |
| Paelopatides42506 | STEROL O-ACYLTRANSFERASE |
| Paelopatides42507 | STEROL O-ACYLTRANSFERASE |
| Paelopatides42508 |
