The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides42146 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides42147 | |
Paelopatides42148 | |
Paelopatides42149 | |
Paelopatides42151 | |
Paelopatides42152 | METAL TRANSPORTER CNNM |
Paelopatides42153 | METAL TRANSPORTER CNNM |
Paelopatides42154 | |
Paelopatides42155 | DDB1- AND CUL4-ASSOCIATED FACTOR 10 |
Paelopatides42157 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42158 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
Paelopatides42159 | NXPE FAMILY MEMBER |
Paelopatides42160 | NXPE FAMILY MEMBER |
Paelopatides42161 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42162 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides42163 | HIV-INDUCED PROTEIN-7-LIKE PROTEASE |
Paelopatides42164 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42165 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42166 | PROTEIN CBG26694 |
Paelopatides42167 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides42168 | PROTEIN CBG26694 |
Paelopatides42169 | SUPRABASAL-SPECIFIC PROTEIN SUPRABASIN |
Paelopatides42170 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides42171 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42172 | RETROTRANSPOSON |
Paelopatides42173 | RETROTRANSPOSON |
Paelopatides42174 | PLEXIN |
Paelopatides42175 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42176 | PLEXIN |
Paelopatides42177 | PARANEOPLASTIC ANTIGEN |
Paelopatides42178 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides42179 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides42180 | ENDONUCLEASE-RELATED |
Paelopatides42181 | PLEXIN |
Paelopatides42183 | |
Paelopatides42184 | |
Paelopatides42185 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides42186 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides42187 | ENDONUCLEASE-RELATED |
Paelopatides42188 | PROTEIN, PUTATIVE-RELATED |
Paelopatides42189 | |
Paelopatides42190 | PROTEIN SON |
Paelopatides42191 | ENDONUCLEASE |
Paelopatides42192 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides42193 | PROTEIN CBG26694 |
Paelopatides42194 | NETRIN RECEPTOR UNC5 |
Paelopatides42195 | |
Paelopatides42196 | COATOMER |
Paelopatides42197 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT |
Paelopatides42198 |