The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides42095 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides42096 | |
| Paelopatides42097 | PROTEIN CBG26694 |
| Paelopatides42098 | BUCENTAUR RELATED |
| Paelopatides42099 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides42100 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| Paelopatides42101 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| Paelopatides42102 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| Paelopatides42103 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| Paelopatides42104 | BUCENTAUR RELATED |
| Paelopatides42105 | - |
| Paelopatides42106 | |
| Paelopatides42107 | NEUROLIGIN |
| Paelopatides42108 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| Paelopatides42109 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides42110 | |
| Paelopatides42111 | |
| Paelopatides42112 | PROTEIN CBG26694 |
| Paelopatides42113 | 60S RIBOSOMAL PROTEIN L37A |
| Paelopatides42114 | RETICULOPHAGY REGULATOR 3 |
| Paelopatides42115 | |
| Paelopatides42116 | MERLIN/MOESIN/EZRIN/RADIXIN |
| Paelopatides42117 | MERLIN/MOESIN/EZRIN/RADIXIN |
| Paelopatides42118 | REPLICATION FACTOR A 1, RFA1 |
| Paelopatides42119 | REPLICATION FACTOR A 1, RFA1 |
| Paelopatides42121 | PROTEIN KINASE RELATED |
| Paelopatides42122 | |
| Paelopatides42123 | |
| Paelopatides42124 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides42125 | SI:CH211-196P9.1-RELATED |
| Paelopatides42126 | |
| Paelopatides42127 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42128 | YNEIN REGULATORY COMPLEX SUBUNIT 5 |
| Paelopatides42129 | |
| Paelopatides42130 | - |
| Paelopatides42131 | |
| Paelopatides42132 | DIACYLGLYCEROL KINASE |
| Paelopatides42133 | |
| Paelopatides42134 | DUF853 DOMAIN-CONTAINING PROTEIN |
| Paelopatides42135 | |
| Paelopatides42136 | |
| Paelopatides42137 | |
| Paelopatides42138 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42139 | POL PROTEIN |
| Paelopatides42140 | ENDONUCLEASE-RELATED |
| Paelopatides42141 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42142 | |
| Paelopatides42143 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides42144 | |
| Paelopatides42145 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
