The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides41784 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
Paelopatides41785 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
Paelopatides41786 | RHO GTPASE-ACTIVATING PROTEIN 100F |
Paelopatides41787 | BUCENTAUR RELATED |
Paelopatides41788 | |
Paelopatides41789 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides41790 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Paelopatides41791 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides41792 | |
Paelopatides41793 | POTASSIUM CHANNEL, SUBFAMILY K |
Paelopatides41794 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
Paelopatides41795 | |
Paelopatides41796 | UNCHARACTERIZED |
Paelopatides41797 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides41798 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides41799 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41800 | |
Paelopatides41801 | BUCENTAUR RELATED |
Paelopatides41802 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41803 | ZINC FINGER PROTEIN |
Paelopatides41804 | PROTEASOME SUBUNIT ALPHA/BETA |
Paelopatides41805 | CARBOHYDRATE SULFOTRANSFERASE |
Paelopatides41806 | |
Paelopatides41807 | PROTEIN CBG26694 |
Paelopatides41808 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides41809 | |
Paelopatides41810 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Paelopatides41811 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Paelopatides41812 | ATP-DEPENDENT RNA HELICASE DBP3 |
Paelopatides41813 | ATP-DEPENDENT RNA HELICASE DBP3 |
Paelopatides41814 | |
Paelopatides41815 | SULFATE TRANSPORTER |
Paelopatides41816 | |
Paelopatides41817 | |
Paelopatides41818 | |
Paelopatides41819 | HEAT SHOCK PROTEIN 70KDA |
Paelopatides41820 | |
Paelopatides41821 | PROTEASE M1 ZINC METALLOPROTEASE |
Paelopatides41822 | EXPRESSED PROTEIN |
Paelopatides41823 | EXPRESSED PROTEIN |
Paelopatides41824 | |
Paelopatides41825 | ATP-DEPENDENT DNA HELICASE |
Paelopatides41826 | ATP-DEPENDENT DNA HELICASE |
Paelopatides41827 | QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 |
Paelopatides41828 | |
Paelopatides41829 | OS01G0948300 PROTEIN |
Paelopatides41830 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
Paelopatides41831 | CS DOMAIN-CONTAINING PROTEIN |
Paelopatides41832 | ADP RIBOSYLATION FACTOR-RELATED |
Paelopatides41833 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |