The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides41522 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41523 | SULFOTRANSFERASE SULT |
| Paelopatides41524 | SULFOTRANSFERASE SULT |
| Paelopatides41525 | |
| Paelopatides41526 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41527 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41528 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides41529 | |
| Paelopatides41530 | PDZ DOMAIN-CONTAINING PROTEIN 8 |
| Paelopatides41531 | |
| Paelopatides41532 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides41533 | |
| Paelopatides41534 | |
| Paelopatides41535 | |
| Paelopatides41536 | |
| Paelopatides41537 | L-GULONOLACTONE OXIDASE |
| Paelopatides41539 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides41540 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides41541 | - |
| Paelopatides41542 | ANGIOTENSIN-CONVERTING ENZYME |
| Paelopatides41543 | ANGIOTENSIN-CONVERTING ENZYME |
| Paelopatides41544 | LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE |
| Paelopatides41545 | LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE |
| Paelopatides41546 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides41547 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides41548 | |
| Paelopatides41549 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
| Paelopatides41550 | NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13 |
| Paelopatides41551 | TESTIS-EXPRESSED PROTEIN 45 |
| Paelopatides41552 | TESTIS-EXPRESSED PROTEIN 45 |
| Paelopatides41553 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| Paelopatides41554 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides41555 | PEROXISOMAL BIOGENESIS FACTOR 3 |
| Paelopatides41556 | |
| Paelopatides41557 | |
| Paelopatides41558 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| Paelopatides41559 | PROTEIN CBG26694 |
| Paelopatides41560 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides41562 | |
| Paelopatides41563 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides41564 | PROTEIN CBG26694 |
| Paelopatides41565 | |
| Paelopatides41566 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| Paelopatides41567 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| Paelopatides41568 | IMMUNOGLOBULIN |
| Paelopatides41569 | |
| Paelopatides41570 | ZINC FINGER PROTEIN |
| Paelopatides41571 | |
| Paelopatides41572 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| Paelopatides41573 |
