The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides41258 | INHIBITOR OF GROWTH PROTEIN |
Paelopatides41259 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides41260 | |
Paelopatides41261 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides41262 | |
Paelopatides41263 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides41265 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41266 | |
Paelopatides41267 | |
Paelopatides41268 | |
Paelopatides41269 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides41270 | PH DOMAIN-CONTAINING PROTEIN |
Paelopatides41271 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41272 | SI:CH211-196P9.1-RELATED |
Paelopatides41273 | |
Paelopatides41274 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
Paelopatides41275 | |
Paelopatides41276 | NETRIN RECEPTOR UNC5 |
Paelopatides41277 | |
Paelopatides41278 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides41279 | ATAXIN 2-RELATED |
Paelopatides41280 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
Paelopatides41281 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
Paelopatides41282 | SULFATE TRANSPORTER |
Paelopatides41283 | PROTEIN CBG26694 |
Paelopatides41284 | SULFATE TRANSPORTER |
Paelopatides41285 | PROTEIN ENHANCER OF SEVENLESS 2B |
Paelopatides41286 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41287 | ALPHA-TECTORIN-RELATED |
Paelopatides41288 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides41289 | |
Paelopatides41290 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides41291 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides41292 | PEROXISOMAL MEMBRANE PROTEIN PEX13 |
Paelopatides41294 | SYNAPTOTAGMIN |
Paelopatides41295 | ENDONUCLEASE-RELATED |
Paelopatides41296 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41297 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Paelopatides41298 | |
Paelopatides41299 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides41300 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41301 | |
Paelopatides41304 | |
Paelopatides41305 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41306 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
Paelopatides41307 | |
Paelopatides41308 | |
Paelopatides41309 | |
Paelopatides41310 | |
Paelopatides41311 |