The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides41199 | HRAS-LIKE SUPPRESSOR - RELATED |
Paelopatides41200 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Paelopatides41206 | LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN |
Paelopatides41207 | |
Paelopatides41208 | DNA-DIRECTED RNA POLYMERASE III |
Paelopatides41209 | PROTEASOME SUBUNIT ALPHA/BETA |
Paelopatides41210 | PROTEIN CBG26694 |
Paelopatides41211 | PROTEIN CBG26694 |
Paelopatides41213 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides41214 | |
Paelopatides41215 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
Paelopatides41216 | |
Paelopatides41217 | ENDONUCLEASE-RELATED |
Paelopatides41218 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Paelopatides41219 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides41220 | CENTROSOMAL PROTEIN CEP126 |
Paelopatides41221 | TUBULIN |
Paelopatides41222 | TUBULIN |
Paelopatides41223 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 |
Paelopatides41224 | |
Paelopatides41225 | TRANSPOSON |
Paelopatides41226 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides41227 | |
Paelopatides41228 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides41229 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides41230 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides41231 | LIPID PHOSPHATE PHOSPHATASE |
Paelopatides41232 | |
Paelopatides41233 | |
Paelopatides41234 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Paelopatides41235 | |
Paelopatides41236 | |
Paelopatides41237 | |
Paelopatides41238 | |
Paelopatides41242 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41243 | WD REPEAT-CONTAINING PROTEIN 73 |
Paelopatides41244 | TSC22 DOMAIN FAMILY PROTEIN 1 |
Paelopatides41245 | TSC22 |
Paelopatides41246 | |
Paelopatides41247 | UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING |
Paelopatides41248 | C13ORF1 PROTEIN-RELATED |
Paelopatides41249 | RETROTRANSPOSON |
Paelopatides41250 | ARMADILLO REPEAT-CONTAINING PROTEIN 3 |
Paelopatides41251 | PROTEIN CBG26694 |
Paelopatides41252 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41253 | METALLOPROTEASE INHIBITOR |
Paelopatides41254 | METALLOPROTEASE INHIBITOR |
Paelopatides41255 | METALLOPROTEASE INHIBITOR |
Paelopatides41256 | SYNAPSIN |
Paelopatides41257 | F-BOX ONLY PROTEIN 7 |