The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides41364 | |
| Paelopatides41365 | TRANSCRIPTION INITIATION FACTOR TFIID |
| Paelopatides41366 | |
| Paelopatides41367 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
| Paelopatides41368 | PROTEIN CBG26694 |
| Paelopatides41369 | |
| Paelopatides41370 | |
| Paelopatides41371 | SI:CH211-196P9.1-RELATED |
| Paelopatides41372 | IP13529P |
| Paelopatides41373 | FUMARATE HYDRATASE-RELATED |
| Paelopatides41374 | BUCENTAUR RELATED |
| Paelopatides41375 | |
| Paelopatides41376 | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED |
| Paelopatides41377 | NXPE FAMILY MEMBER |
| Paelopatides41378 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41379 | DIAMINE N-ACETYLTRANSFERASE |
| Paelopatides41380 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides41381 | AGAP005574-PA |
| Paelopatides41382 | NUCLEOPORIN AMO1-LIKE |
| Paelopatides41383 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides41384 | SI:CH211-196P9.1-RELATED |
| Paelopatides41385 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides41386 | |
| Paelopatides41387 | |
| Paelopatides41388 | |
| Paelopatides41389 | |
| Paelopatides41390 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41391 | PKSB |
| Paelopatides41392 | |
| Paelopatides41393 | |
| Paelopatides41394 | WD40 REPEAT DOMAIN 95 |
| Paelopatides41395 | WD40 REPEAT PROTEIN |
| Paelopatides41396 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41397 | BUCENTAUR RELATED |
| Paelopatides41399 | |
| Paelopatides41400 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN |
| Paelopatides41401 | MEVALONATE KINASE/GALACTOKINASE |
| Paelopatides41402 | - |
| Paelopatides41403 | GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN |
| Paelopatides41404 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
| Paelopatides41405 | PROTEIN CBG26694 |
| Paelopatides41406 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides41407 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41408 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides41409 | ENDONUCLEASE-RELATED |
| Paelopatides41410 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides41411 | |
| Paelopatides41412 | |
| Paelopatides41413 | |
| Paelopatides41414 |
