The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides41312 | - |
| Paelopatides41313 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
| Paelopatides41314 | - |
| Paelopatides41315 | UBIQUITIN-CONJUGATING ENZYME E2 |
| Paelopatides41316 | TETRASPANIN |
| Paelopatides41317 | |
| Paelopatides41318 | LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1 |
| Paelopatides41319 | LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1 |
| Paelopatides41320 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides41321 | SERINE/THREONINE PROTEIN KINASE |
| Paelopatides41322 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41323 | BRIDGING INTEGRATOR 3 |
| Paelopatides41324 | |
| Paelopatides41325 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| Paelopatides41326 | |
| Paelopatides41327 | MYB/SANT-LIKE DNA-BINDING DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides41328 | |
| Paelopatides41329 | |
| Paelopatides41330 | |
| Paelopatides41331 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41332 | |
| Paelopatides41335 | PROLINE-RICH EXTENSIN-LIKE |
| Paelopatides41336 | ENDONUCLEASE-RELATED |
| Paelopatides41337 | |
| Paelopatides41338 | |
| Paelopatides41339 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides41340 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides41341 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41342 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41343 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41344 | LARVAL STORAGE PROTEIN/PHENOLOXIDASE |
| Paelopatides41345 | |
| Paelopatides41346 | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN |
| Paelopatides41347 | |
| Paelopatides41348 | |
| Paelopatides41349 | |
| Paelopatides41350 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| Paelopatides41351 | |
| Paelopatides41352 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 |
| Paelopatides41353 | PROTEIN ODR-4 HOMOLOG |
| Paelopatides41354 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides41355 | PROTEIN ODR-4 HOMOLOG |
| Paelopatides41356 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| Paelopatides41357 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| Paelopatides41358 | GH3 DOMAIN-CONTAINING PROTEIN |
| Paelopatides41359 | GH3 DOMAIN-CONTAINING PROTEIN |
| Paelopatides41360 | GH3 DOMAIN-CONTAINING PROTEIN |
| Paelopatides41361 | GH3 DOMAIN-CONTAINING PROTEIN |
| Paelopatides41362 | SOLUTE CARRIER FAMILY 52 |
| Paelopatides41363 | SOLUTE CARRIER FAMILY 52 |
