The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides41468 | ZINC FINGER PROTEIN |
| Paelopatides41469 | RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1 |
| Paelopatides41470 | |
| Paelopatides41471 | PROTEASOME ASSEMBLY CHAPERONE 2 |
| Paelopatides41472 | |
| Paelopatides41473 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41474 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
| Paelopatides41475 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
| Paelopatides41476 | |
| Paelopatides41477 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41480 | SOLUTE CARRIER FAMILY 2 |
| Paelopatides41481 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides41482 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides41483 | SORTING NEXIN |
| Paelopatides41484 | UNCHARACTERIZED |
| Paelopatides41485 | SKELETOR-RELATED |
| Paelopatides41486 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides41487 | SKELETOR-RELATED |
| Paelopatides41488 | SKELETOR-RELATED |
| Paelopatides41490 | |
| Paelopatides41491 | SKELETOR-RELATED |
| Paelopatides41492 | SKELETOR-RELATED |
| Paelopatides41493 | SKELETOR-RELATED |
| Paelopatides41495 | NEUROPEPTIDES RECEPTOR |
| Paelopatides41496 | WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1 |
| Paelopatides41497 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| Paelopatides41498 | |
| Paelopatides41499 | PROTEIN MIS12 HOMOLOG |
| Paelopatides41500 | |
| Paelopatides41501 | OS05G0310600 PROTEIN |
| Paelopatides41502 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41503 | |
| Paelopatides41504 | |
| Paelopatides41505 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41506 | |
| Paelopatides41507 | |
| Paelopatides41508 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| Paelopatides41509 | HYDROLASE |
| Paelopatides41510 | ALPHA-AMYLASE |
| Paelopatides41511 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides41512 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides41513 | |
| Paelopatides41514 | SULFOTRANSFERASE SULT |
| Paelopatides41515 | |
| Paelopatides41516 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides41517 | |
| Paelopatides41518 | |
| Paelopatides41519 | |
| Paelopatides41520 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides41521 | PROTEIN, PUTATIVE-RELATED |
