The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides41415 | PROTEIN CBG26694 |
| Paelopatides41416 | PROTEIN CBG26694 |
| Paelopatides41417 | AVIDIN-RELATED |
| Paelopatides41418 | |
| Paelopatides41419 | |
| Paelopatides41420 | AMINO ACID TRANSPORTER |
| Paelopatides41421 | PEPTIDASE |
| Paelopatides41422 | |
| Paelopatides41423 | MULTI-COPPER OXIDASE |
| Paelopatides41424 | PROTEIN CBG26694 |
| Paelopatides41425 | |
| Paelopatides41426 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides41427 | |
| Paelopatides41428 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides41429 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides41430 | PROTEIN CBG26694 |
| Paelopatides41431 | PROTEIN CBG26694 |
| Paelopatides41432 | PROTEIN CBG26694 |
| Paelopatides41433 | PRESENILIN |
| Paelopatides41434 | |
| Paelopatides41435 | |
| Paelopatides41436 | PRESENILIN |
| Paelopatides41437 | |
| Paelopatides41438 | ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER |
| Paelopatides41439 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| Paelopatides41440 | ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER |
| Paelopatides41441 | |
| Paelopatides41442 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| Paelopatides41443 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| Paelopatides41444 | BANK1/PIK3AP1 FAMILY MEMBER |
| Paelopatides41445 | N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT |
| Paelopatides41446 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
| Paelopatides41447 | VILLIN |
| Paelopatides41448 | VILLIN |
| Paelopatides41449 | REVERSE TRANSCRIPTASES |
| Paelopatides41450 | PROTEIN CBG26694 |
| Paelopatides41451 | |
| Paelopatides41452 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41453 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41454 | |
| Paelopatides41455 | |
| Paelopatides41459 | POL PROTEIN |
| Paelopatides41460 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides41461 | CRUMBS FAMILY MEMBER |
| Paelopatides41462 | |
| Paelopatides41463 | |
| Paelopatides41464 | NUCLEAR RNA EXPORT FACTOR |
| Paelopatides41465 | HISTONE H3 |
| Paelopatides41466 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41467 |
