The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides41574 | |
Paelopatides41575 | |
Paelopatides41576 | AGAP005574-PA |
Paelopatides41577 | ZINC FINGER PROTEIN |
Paelopatides41578 | AGAP005574-PA |
Paelopatides41579 | N-FATTY-ACYL-AMINO ACID SYNTHASE/HYDROLASE PM20D1 |
Paelopatides41580 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41581 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41582 | ZINC FINGER PROTEIN |
Paelopatides41583 | NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT |
Paelopatides41584 | |
Paelopatides41585 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41586 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides41587 | |
Paelopatides41588 | |
Paelopatides41589 | ENDONUCLEASE-RELATED |
Paelopatides41590 | POL PROTEIN |
Paelopatides41591 | REVERSE TRANSCRIPTASES |
Paelopatides41592 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41593 | |
Paelopatides41596 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides41597 | F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED |
Paelopatides41598 | CONTACTIN 5 |
Paelopatides41599 | PROTEIN CBG11839-RELATED |
Paelopatides41600 | |
Paelopatides41601 | PROTEIN CBG11839-RELATED |
Paelopatides41602 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides41603 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides41604 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides41607 | |
Paelopatides41608 | UNCHARACTERIZED DUF1308 |
Paelopatides41609 | |
Paelopatides41610 | |
Paelopatides41611 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41612 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41615 | FI04643P-RELATED |
Paelopatides41616 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41617 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides41618 | T-BOX PROTEIN-RELATED |
Paelopatides41619 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41620 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41621 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41622 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides41623 | E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER |
Paelopatides41624 | SI:CH211-196P9.1-RELATED |
Paelopatides41625 | MEIOSIS-EXPRESSED GENE 1 PROTEIN |
Paelopatides41626 | ZINC FINGER PROTEIN |
Paelopatides41627 | |
Paelopatides41628 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
Paelopatides41629 | ZINC FINGER AND BTB DOMAIN-CONTAINING |