The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides41630 | TELOMERIC REPEAT-BINDING FACTOR 2 TERF2 |
Paelopatides41631 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides41632 | MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F |
Paelopatides41633 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides41634 | MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F |
Paelopatides41635 | |
Paelopatides41636 | |
Paelopatides41637 | FLAVIN MONOAMINE OXIDASE |
Paelopatides41638 | |
Paelopatides41639 | |
Paelopatides41640 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides41641 | |
Paelopatides41642 | |
Paelopatides41643 | LP06937P |
Paelopatides41644 | TITIN |
Paelopatides41645 | |
Paelopatides41646 | GLUTATHIONYL-HYDROQUINONE REDUCTASE |
Paelopatides41647 | DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBER |
Paelopatides41648 | IMPORTIN ALPHA |
Paelopatides41649 | PROTEIN CBG26694 |
Paelopatides41650 | |
Paelopatides41651 | - |
Paelopatides41652 | |
Paelopatides41653 | SERINE/THREONINE PROTEIN KINASE |
Paelopatides41654 | |
Paelopatides41655 | NETRIN/LAMININ-RELATED |
Paelopatides41656 | P53 INDUCED PROTEIN |
Paelopatides41657 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41658 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides41659 | |
Paelopatides41660 | |
Paelopatides41661 | UNCHARACTERIZED |
Paelopatides41663 | |
Paelopatides41664 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides41665 | PROTEIN CBG26694 |
Paelopatides41666 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
Paelopatides41667 | |
Paelopatides41668 | |
Paelopatides41669 | |
Paelopatides41670 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
Paelopatides41671 | |
Paelopatides41672 | CYTOCHROME P450 508A4-RELATED |
Paelopatides41673 | |
Paelopatides41674 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides41675 | |
Paelopatides41676 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides41677 | PEPTIDASE |
Paelopatides41678 | TRANSPOSON |
Paelopatides41679 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides41680 | RETROTRANSPOSON |