The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides41093 | |
| Paelopatides41094 | |
| Paelopatides41095 | |
| Paelopatides41096 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41097 | |
| Paelopatides41098 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides41099 | |
| Paelopatides41100 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides41101 | |
| Paelopatides41102 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides41103 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41104 | RIBOFLAVIN TRANSPORTER RIBJ |
| Paelopatides41105 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides41106 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41107 | AQUAPORIN TRANSPORTER |
| Paelopatides41108 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60 |
| Paelopatides41109 | |
| Paelopatides41110 | |
| Paelopatides41111 | |
| Paelopatides41112 | PAR-6-RELATED |
| Paelopatides41113 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41114 | |
| Paelopatides41118 | |
| Paelopatides41119 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides41120 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides41121 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides41122 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides41123 | TYROSINE-PROTEIN KINASE |
| Paelopatides41124 | |
| Paelopatides41125 | BUCENTAUR RELATED |
| Paelopatides41126 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides41127 | |
| Paelopatides41128 | PROTEIN CBG26694 |
| Paelopatides41129 | WSCD FAMILY MEMBER CG9164 |
| Paelopatides41130 | 3'-5' EXONUCLEASE ERI1-RELATED |
| Paelopatides41131 | REVERSE TRANSCRIPTASES |
| Paelopatides41132 | FRIEND OF GATA2-RELATED |
| Paelopatides41133 | FRIEND OF GATA2-RELATED |
| Paelopatides41134 | EXPRESSED PROTEIN |
| Paelopatides41135 | |
| Paelopatides41136 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 62-RELATED |
| Paelopatides41137 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides41138 | |
| Paelopatides41139 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| Paelopatides41140 | REVERSE TRANSCRIPTASES |
| Paelopatides41141 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| Paelopatides41142 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides41144 | PROTEIN EVA-1 |
| Paelopatides41145 | |
| Paelopatides41146 | DUF3504 DOMAIN-CONTAINING PROTEIN |
