The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides40890 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides40891 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides40892 | |
| Paelopatides40893 | |
| Paelopatides40894 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| Paelopatides40895 | |
| Paelopatides40896 | - |
| Paelopatides40897 | |
| Paelopatides40898 | |
| Paelopatides40899 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40900 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides40901 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 |
| Paelopatides40902 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 |
| Paelopatides40903 | MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN |
| Paelopatides40904 | MINA53 MYC INDUCED NUCLEAR ANTIGEN |
| Paelopatides40905 | MINA53 MYC INDUCED NUCLEAR ANTIGEN |
| Paelopatides40906 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides40907 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides40908 | MATING RESPONSE PROTEIN POI2 |
| Paelopatides40909 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides40910 | |
| Paelopatides40911 | SEROLOGICALLY DEFINED COLON CANCER ANTIGEN 8 |
| Paelopatides40912 | TETRATRICOPEPTIDE-LIKE HELICAL |
| Paelopatides40913 | |
| Paelopatides40914 | |
| Paelopatides40915 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides40916 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides40917 | POL PROTEIN |
| Paelopatides40918 | ENDONUCLEASE-RELATED |
| Paelopatides40919 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides40920 | SI:CH211-196P9.1-RELATED |
| Paelopatides40921 | |
| Paelopatides40922 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| Paelopatides40923 | |
| Paelopatides40924 | MACROGLOBULIN / COMPLEMENT |
| Paelopatides40925 | |
| Paelopatides40926 | BETA LACTAMASE DOMAIN |
| Paelopatides40927 | BETA LACTAMASE DOMAIN |
| Paelopatides40928 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| Paelopatides40929 | |
| Paelopatides40930 | |
| Paelopatides40931 | |
| Paelopatides40932 | |
| Paelopatides40933 | SERINE/THREONINE-PROTEIN KINASE PLK |
| Paelopatides40934 | PRE-MRNA SPLICING FACTOR PRP31 |
| Paelopatides40935 | |
| Paelopatides40936 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
| Paelopatides40937 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides40938 | |
| Paelopatides40939 |
