The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides40733 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40734 | GREMLIN 1 |
Paelopatides40735 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40736 | PROTEIN CBG26694 |
Paelopatides40737 | D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
Paelopatides40738 | |
Paelopatides40739 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides40740 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides40741 | |
Paelopatides40742 | |
Paelopatides40743 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides40744 | CYTOCHROME P450 20A1 |
Paelopatides40745 | PROTEIN CBG26694 |
Paelopatides40746 | |
Paelopatides40747 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides40748 | CENTROSOMAL PROTEIN OF 290 KDA |
Paelopatides40749 | |
Paelopatides40750 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Paelopatides40751 | UPF0472 PROTEIN C16ORF72 |
Paelopatides40752 | AMP DEAMINASE |
Paelopatides40753 | AMP DEAMINASE |
Paelopatides40754 | |
Paelopatides40756 | OXIDOREDUCTASE NAD-BINDING DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides40757 | PROTEIN CBG26694 |
Paelopatides40758 | |
Paelopatides40759 | ZINC FINGER PROTEIN ZIC AND GLI |
Paelopatides40760 | |
Paelopatides40761 | |
Paelopatides40762 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Paelopatides40763 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Paelopatides40764 | THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1 |
Paelopatides40765 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides40766 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides40767 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40768 | ARYLSULFATASE FAMILY MEMBER |
Paelopatides40769 | PEPTIDE N-GLYCANASE PNGASE -RELATED |
Paelopatides40770 | PEPTIDE N-GLYCANASE PNGASE -RELATED |
Paelopatides40771 | PROTEIN CBG26694 |
Paelopatides40772 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides40773 | MACROGLOBULIN / COMPLEMENT |
Paelopatides40774 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides40775 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides40776 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 62-RELATED |
Paelopatides40777 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides40778 | |
Paelopatides40779 | |
Paelopatides40780 | GCIP-INTERACTING PROTEIN P29 |
Paelopatides40781 | CELL DIVISION CYCLE 5-LIKE PROTEIN |
Paelopatides40782 | CELL DIVISION CYCLE 5-LIKE PROTEIN |
Paelopatides40783 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |