The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides40524 | |
| Paelopatides40525 | |
| Paelopatides40526 | TORSIN |
| Paelopatides40527 | TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER |
| Paelopatides40528 | |
| Paelopatides40529 | OTU DOMAIN CONTAINING PROTEIN |
| Paelopatides40530 | OTU DOMAIN CONTAINING PROTEIN |
| Paelopatides40531 | RAS-LIKE FAMILY MEMBER 11 |
| Paelopatides40532 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides40533 | |
| Paelopatides40534 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40535 | |
| Paelopatides40536 | |
| Paelopatides40537 | |
| Paelopatides40538 | AP ENDONUCLEASE |
| Paelopatides40539 | |
| Paelopatides40540 | SLR5058 PROTEIN |
| Paelopatides40541 | |
| Paelopatides40542 | UNCHARACTERIZED |
| Paelopatides40543 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides40544 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides40545 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides40546 | |
| Paelopatides40547 | |
| Paelopatides40548 | CWF19, CELL CYCLE CONTROL PROTEIN |
| Paelopatides40549 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40550 | RETROTRANSPOSON |
| Paelopatides40551 | |
| Paelopatides40552 | SPLICING FACTOR 3A SUBUNIT 2 |
| Paelopatides40553 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
| Paelopatides40554 | |
| Paelopatides40555 | VASCULAR CELL ADHESION MOLECULE 1 |
| Paelopatides40556 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides40560 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides40561 | |
| Paelopatides40562 | WD40 REPEAT PROTEIN |
| Paelopatides40563 | ZYX102 PROTEIN |
| Paelopatides40564 | |
| Paelopatides40565 | EXOCYST COMPLEX COMPONENT 8 |
| Paelopatides40566 | |
| Paelopatides40567 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| Paelopatides40568 | |
| Paelopatides40569 | |
| Paelopatides40570 | |
| Paelopatides40571 | |
| Paelopatides40572 | COILED-COIL DOMAIN-CONTAINING PROTEIN 171 |
| Paelopatides40573 | CENTLEIN |
| Paelopatides40574 | |
| Paelopatides40575 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides40576 | CARBOXYLESTERASE |
