The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides40420 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40421 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides40422 | |
Paelopatides40423 | OPSIN |
Paelopatides40424 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides40425 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40426 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides40427 | GAG-RELATED PROTEIN |
Paelopatides40428 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides40429 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides40430 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides40431 | |
Paelopatides40432 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40433 | |
Paelopatides40434 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides40435 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Paelopatides40436 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40437 | UNCHARACTERIZED |
Paelopatides40438 | |
Paelopatides40439 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40440 | AMINO ACID TRANSPORTER |
Paelopatides40441 | AMINO ACID TRANSPORTER |
Paelopatides40442 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides40443 | AMINO ACID TRANSPORTER |
Paelopatides40444 | AMINO ACID TRANSPORTER |
Paelopatides40445 | |
Paelopatides40446 | |
Paelopatides40448 | |
Paelopatides40449 | |
Paelopatides40450 | |
Paelopatides40451 | INTIMAL THICKNESS RECEPTOR-RELATED |
Paelopatides40452 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides40453 | |
Paelopatides40454 | PROTEIN CBG26694 |
Paelopatides40455 | PROTEIN CBG26694 |
Paelopatides40456 | PROTEIN CBG26694 |
Paelopatides40457 | CAMK FAMILY PROTEIN KINASE |
Paelopatides40458 | INHIBITOR OF APOPTOSIS |
Paelopatides40459 | |
Paelopatides40460 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides40461 | SAM-DEPENDENT METHYLTRANSFERASE |
Paelopatides40462 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Paelopatides40463 | |
Paelopatides40464 | |
Paelopatides40466 | |
Paelopatides40467 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Paelopatides40468 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
Paelopatides40469 | |
Paelopatides40470 | RNA PROCESSING PROTEIN LD23810P |
Paelopatides40471 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |