The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides40100 | TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED |
Paelopatides40101 | TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED |
Paelopatides40102 | ACETOACETYL-COA SYNTHETASE |
Paelopatides40103 | UNCHARACTERIZED |
Paelopatides40104 | UNCHARACTERIZED |
Paelopatides40105 | MULTI-COPPER OXIDASE |
Paelopatides40106 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
Paelopatides40107 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
Paelopatides40108 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides40109 | |
Paelopatides40110 | REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED |
Paelopatides40111 | REVERSE TRANSCRIPTASES |
Paelopatides40112 | |
Paelopatides40113 | REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED |
Paelopatides40114 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN |
Paelopatides40115 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40116 | |
Paelopatides40117 | |
Paelopatides40118 | |
Paelopatides40119 | PROTEIN CBG26694 |
Paelopatides40120 | PROTEIN CBG26694 |
Paelopatides40121 | |
Paelopatides40122 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides40123 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
Paelopatides40124 | |
Paelopatides40125 | |
Paelopatides40126 | |
Paelopatides40127 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
Paelopatides40130 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40131 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
Paelopatides40132 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides40133 | |
Paelopatides40134 | |
Paelopatides40135 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides40136 | SLR1189 PROTEIN |
Paelopatides40137 | SLR1189 PROTEIN |
Paelopatides40138 | |
Paelopatides40139 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Paelopatides40140 | |
Paelopatides40141 | |
Paelopatides40142 | NECTIN-RELATED |
Paelopatides40143 | DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2 |
Paelopatides40144 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides40145 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides40146 | DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2 |
Paelopatides40147 | MYOSIN |
Paelopatides40148 | MYOSIN |
Paelopatides40149 | PROTEIN CBG26694 |
Paelopatides40150 | PROTEIN CBG26694 |
Paelopatides40151 | MYOSIN VII, XV |